Resources
R
- R-project home
- RStudio
- TryR
- Intro to R @ Datacamp
- Advanced R
- R Style Guide
- R documentation
- Software Carpentry
Python
- Software Carpentry
- IPython
- Anyone for a pull request?
knitr
markdown
- R markdown (great reference!)
- R markdown reference (pdf)
- R markdown cheat sheet (pdf)
- Original markdown
git/GitHub
- GitHub Help
- GitHub Guides
- git cheat sheet (pdf)
- ProGit book
- GitHub Training
- Git Imersion
- Software Carpentry
bash
- bash beginners guide
- Software Carpentry
- Anyone for a pull request?
make
- Software Carpentry
- Anyone for a pull request?
Reproducible research
- Coursera class
- R packages
- Reproducible Research with R and RStudio
- Bioinformatics Data Skills (Pat has pdf)